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Publications

Publications


  • Mechanical microscopy of cancer cells: TGF-β induced epithelial to mesenchymal transition corresponds to low intracellular viscosity in cancer cells. Gautam D; Srivastava A; Chowdhury R; Laskar I; Mukherjee S and Rao VKP. The Journal of the Acoustical Society of America (JASA); 2023; Aug (Accepted).
  • Rational molecular designing of aggregation enhanced emission (AEE) active red-emitting Iridium(III) complexes: effect of lipophilicity and nanoparticle encapsulation on photodynamic therapy efficacy. Sumit; Kavya M; Khanna, S; Kachwal V; Karnam S; Santosh M; Chowdhury R; RoyA and Laskar I. ACS Applied Bio Materials; 2023; March (Accepted).
  • Transforming growth factor- β mediated regulation of epigenome is required for epithelial to mesenchymal transition associated features in liver cancer cells. Srivastava A, Sharma H, Chowdhury S, Chowdhury R and Mukherjee S. Heliyon; 2023; March 28, e14665 (Accepted).
  • Transcriptomic analysis reveals differential adaptation of colorectal cancer cells to low and acute doses of cisplatin. Saini H; Dave R; Chatterjee S; Mandloi A; Sharma H; Daiya A; Mukherjee S; Chowdhury R and Chowdhury S. Gene; 2023; May 15;864:147304.
  • Epigenetic adaptations in drug tolerant tumor cells. Mani N, Daiya A, Mukherjee S, Chowdhury R and Chowdhury S. Advances in Cancer Research; Book Series; Elsevier; Nov 16; 2022.
  • Autophagy in Stem Cell Maintenance and Differentiation. Sahu A, Bandyopadhyay B, Chowdhury R & Mukherjee S. Part of ‘Stem Cell Biology and Regenerative Medicine’ Book series; STEMCELL, Springer; 2022; volume 73; pp 35–58.
  • Chloroquine induces transitory attenuation of proliferation of human lung cancer cells through regulation of mutant P53 and YAP. Saini H, Chowdhury M, Mukherjee S, Chowdhury S and Chowdhury R. Molecular Biology Reports (MOLE). 111; Nov 16; 2022. 
  • Silver nanoparticle-induced alteration of mitochondrial and ER homeostasis affects human breast cancer cell fate. Dey S, Fageria L, Sharma A, Pande S, Mukherjee S, Chowdhury R and Chowdhury S. Toxicology Reports. 2022; 9; 1977-84.
  • Analysis of Transcriptomic Data Generated from Drug-Treated Cancer Cell Line. Kushwaha S, Mukherjee  S, Chowdhury R, Chowdhury S. Methods Mol Biol. 2022;2535:119-129.
  • Interleukin-6 induced proliferation is attenuated by Transforming Growth Factor-β induced signaling in human hepatocellular carcinoma cells. Srivastava A, Sharma H, Khanna S, Tejasvini SB, Chowdhury S, Chowdhury R and Mukherjee S. Frontiers in Oncology, 2022; 11. IF 6.2
  • Verteporfin disrupts multiple steps of autophagy and regulates p53 to sensitize osteosarcoma cells. Saini H, Sharma H, Mukherjee S, Chowdhury S and Chowdhury R. Cancer Cell International; 2021; 21:52. IF 5.72.
  • A genome wide expression profile of non-coding RNAs in human osteosarcoma cells as they acquire resistance to cisplatin. Harshita S, Mukherjee S, Chowdhury R and Chowdhury S. Discover Oncology. 2021; 12:43. IF 3.8
  • Development of a tumor extracellular pH-responsive nanocarrier by terminal histidine conjugation in a star shaped poly(lactic-co-glycolic acid). Swetha KL, Maravajjala KS, Sharma S, Chowdhury, Roy A. European Polymer Journal; 2021; 147, 110337. IF 3.8.
  • Engineering a light-driven cyanine based molecular rotor to enhance the sensitivity towards a viscous medium. Kachwal V, Srivastava A, Thakar S,a Zubiria-Ulacia M, Gautam D, Majumder S, Venkatesh K P, Casanova D, Chowdhury R, Rath N, Mukherjee S, Alemany P and Laskar IR. Materials Advances (RSC); 2021; 2, 4804.
  • GaN HEMT based biosensor for the detection of breast cancer marker (C-erbB2). Chaturvedi N, Chowdhury R, Mishra S, Singh K, Chaturvedi N, Chauhan A, Pande S, Sharma N, Parjapat P, Sharma R, Kothari P and Singh AK. Semicond. Sci. Technol. 2021. 36; 045018. IF 2.6.
  • Exploring the extensive crosstalk between the antagonistic cytokines- TGF-β and TNF-α in regulating cancer pathogenesis. Dash S, Srivastava A, Sahu A, Chowdhury R and Mukherjee S. Cytokine. 2020. 138:155348. IF 3.4.
  • Disulfiram potentiates docetaxel cytotoxicity in breast cancer cells through enhanced ROS and autophagy. Swetha KL, Sharma S, Chowdhury R and Roy A*. Pharmacological Reports; Jul 2020. IF 3.42.
  • Common and Unique microRNAs in Multiple Carcinomas Regulate Similar Network of Pathways to Mediate Cancer Progression. Niveditha D, Jasoria M, Narayan J, Majumder S, Mukherjee S, Chowdhury R and Chowdhury S*. Scientific Reports; 2020; 10:2331. IF 4.37.
  • A New Aggregation Induced Emission Active Halochromic White Light Emissive Molecule: Combined Experimental and Theoretical Study. Chaudhary J, Mittal V, Mishra S, Daiya A, Chowdhury R,* Laskar IR,* and Roy RK*. Journal of Phy Chemistry. May 2020; 124, 28, 15406–15417. IF 2.6.
  • Drug Tolerant Cells: An Emerging Target With Unique Transcriptomic Features. Niveditha D, Sharma H, Sahu A, Majumder S, Chowdhury R and Chowdhury S*. Cancer Informatics; Oct 2019; 18: 1176935119881633. IF 2.0.
  • Transcriptomic analysis associated with reversal of cisplatin sensitivity in drug resistant osteosarcoma cells after a drug holiday. Niveditha D, Sharma H, Majumder S, Mukherjee S, Chowdhury R* and Chowdhury S. BMC Cancer; 2019; 19:1045. IF 4.4.
  • A global transcriptomic pipeline decoding core network of genes involved in stages leading to acquisition of drug-resistance to cisplatin in osteosarcoma cells. Niveditha D, Mukherjee S, Majumder S, Chowdhury R* and Chowdhury S* (*corresponding authors). Bioinformatics; May 2019. 15;35(10):1701-1711. IF 6.93.
  • Facile Incorporation of ‘Aggregation Induced Emission’ Active Conjugated Polymer into Mesoporous Silica Hollow Nanospheres: Synthesis, Characterization, Photophysical Studies and Application in Bioimaging. Sengottuvelu D, Abhishek R, Srivastava A, Mukherjee S, Pasha S, Kachwal V, Fageria L, Chowdhury R* and Laskar I*. ACS Applied Materials & Interfaces; Jul 2019; 11, 34, 31270–31282. IF 8.4
  • Functional Autophagic Flux Regulates AgNP Uptake And The Internalized Nanoparticles Determine Tumor Cell Fate By Temporally Regulating Flux. Fageria L, Bambroo V, Mathew A, Mukherjee S, Chowdhury R* and Pande S*. International Journal of Nanomedicine; 2019:14 9063–9076. IF 4.47.
  • Autophagy Regulated by Gain of Function Mutant p53 Enhances Proteasomal Inhibitor-Mediated Cell Death through Induction of ROS and ERK in Lung Cancer Cells. Saini H, Hakeem I, Mukherjee S, Chowdhury S, and Chowdhury R*. Journal of Oncology; 2019. DOI:10.1155/2019/6164807Corpus ID: 59540149. IF 4.37.
  • Autophagy inhibition potentiates SAHA mediated apoptosis in glioblastoma cells by accumulation of damaged mitochondria. Lohitesh K, Saini H, Srivastava A, Mukherjee S, Roy A and Chowdhury R*. Oncology Reports; 2018;39(6):2787-2796. IF 3.9
  • TGF-β2-induced EMT is dampened by inhibition of autophagy and TNF-α treatment. Dash S, Prasad M.S., Balaji R, Chowdhury R* and Mukherjee S* (*corresponding authors). Oncotarget; 2018; 9:6433-6449. IF 3.3.
  • Evaluation of a Novel Platinum(II)Based AIE Compound-Encapsulated Mesoporous Silica Nanoparticles for Cancer Theranostic Application. Pasha SS#, Fageria L#, Climent C, Rath PN, Alemany P, Chowdhury R*, Roy A* and Laskar IR* (*corresponding authors). Dalton Transactions; 2018;  47, 4613-4624 DOI: 10.1039/C7DT04232A. IF 4.
  • "Resistance a major hindrance to chemotherapy in Hepatocellular Carcinoma: An insight". Lohitesh K*, Chowdhury R*,  Mukherjee S. Cancer Cell International; 2018; Mar 20;18:44. IF 3.9
  • Exploring the Hidden Potential of Benzothiazole Based Schiff base “AIE and ESIPT” active for pH Sensing, Intracellular Imaging and Ultrasensitive & Selective detection of Aluminium (Al3+). Kachawal V, Isukapalli SVK, Fageria L, Chaudhary J, Roy RK, Chowdhury R* and Laskar IR*  (*corresponding authors). Analyst; 2018; 143, 3741 - 3748. IF 3.88.
  • Evaluation of apoptosis and autophagy inducing potential of Berberis aristata, Azadirachta indica and their synergistic combinations in parental and resistant human osteosarcoma cells. Sengupta P, Raman S, Chowdhury R, Lohitesh K, Saini Heena, Mukherjee S*, Paul A*. Frontiers in Oncology; 2017, 7:296. IF 4.4.
  • Synthesis and Evaluation of Bile Acid Amides of α-Cyanostilbenes as Anticancer Agents. Agarwal D, Singh RP, Lohitesh K, Jha PN, Chowdhury R, Sakhujaa R*. Molecular Diversity; 2017; 1-17. IF 1.9.
  • Design, in silico modeling, biodistribution study of rutin and quercetin loaded-stable human hair keratin nanoparticles intended for anticancer drug delivery. Selvaraj K, Panneerselvam T, Balasubramanian S, Murugesan S, Chowdhury R, Chowdhury A, Bhattacharjee, C. BioMed Phy & Eng; 2017.
  • Novel Spiro/non-Spiro Pyranopyrazoles: eco-Friendly Synthesis, in-vitro Anticancer Activity, DNA binding, and in-silico Docking Studies; Shukla P, Sharma A, Fageria L and Chowdhury R. Current Bioactive Compounds (CBC); 2017; 13.
  • Biosynthesized protein-capped silver nanoparticles induce ROS-dependent pro-apoptotic signals and pro-survival autophagy in cancer cells. Fageria L, Pareek V, Dilip R, Bhargava A, Pasha S, Laskar I, Saini H, Dash S, Chowdhury R*, Panwar, J* (*co-corresponding authors). ACS Omega, 2017, 2 (4), pp 1489–1504.
  • Understanding cancer complexome using networks, spectral graph theory and multilayer framework. Rai A, Pradhan P, Nagraj J, Lohitesh K, Chowdhury R and Jalan S. 2017, Scientific Reports,7: 41676. IF 4.2
  • Aggregation Induced Emission’ Active Iridium(III) Complexes with Applications in Mitochondrial Staining. Alam P, Dash S, Climent C, Kaur G, Choudhury AR, Casanova D, Alemany P, Chowdhury R*, Laskar IR*. RSC Advances (*co-corresponding authors), 2017, 7, 5642-48. IF 3.1.
  • The dynamic role of autophagy and MAPK signaling in determining cell fate under cisplatin stress. Mukherjee S, Dash S, Lohitesh K and Chowdhury R*. PloS One. 2017, 12(6): e0179203. IF 2.8.
  • Self-Assembled Oleic Acid Nanoparticle Mediated Targeting of Mitogen Activated Protein Kinase Signaling in Combination with DNA Damage in Cancer Cells. Palvai S, More P, Mapara N, Nagraj J, Chowdhury R, Basu S. ChemNanoMat; 2016, 2(3):201-11. IF 3.2.
  • Chitosan encapsulated ZnS:M (M: Fe3+ or Mn2+) quantum dots for fluorescent labeling of sulphate reducing bacteria. Raghuram HS, Pradeep S, Dash S, Chowdhury R and Mazumder S. Bulletin of Materials Science;  2016:1-9. IF 0.8
  • Russells viper venom (RVV) affects regulation of small GTPases and causes nuclear damage. Pathan JS, Martin A,  Chowdhury R, Sarkar A and Chakrabarty D. Toxicon; Dec 2015,108:216-25. IF 2.5.
  • Cancer: an evolutionary perspective. Nagraj J, Mukherjee S and Chowdhury R. J Cancer Biol Res; 2015, 3(2):1064.
  • "Arsenic Toxicity: Remediation and Treatment". Chowdhury R, Verma SK, Mukherjee S. CRC Press, Taylor & Francis, Boca Raton, Florida. Book Chapter, Aug 2015.
  • Fast microwave assisted synthesis of pyrazolopyran derivatives as new anticancer agents. Shukla P, Sharma A, Chowdhury R, Dash S and Pallavi B. Current Microwave Chemistry; 2015, 3:1-6.
  • Dual drug loaded vitamin D3 nanoparticle to target drug resistance in cancer. Palvai S, Nagraj J, Mapara N, Chowdhury R* and Basu S* (*co-corresponding authors). RSC Advances; 2014, 4:57271-57281. IF 3.1.
  • Rare Observation of ‘Aggregation Induced Emission’ in Cyclometalated Platinum(II) Complexes and their Biological Activities. Pasha S, Alam P, Dash S, Kaur G, Banerjee D, Chowdhury R, Rath N, Choudhury RA and Laskar IR. RSC Advances; 2014, 4:50549-50553. IF 3.1.
  • Arsenic Extrusion and Energy Derivation as Survival Mechanism in a Novel Exiguobacterium Isolated from Arsenic Contaminated Groundwater of West Bengal. Chowdhury R, Karak P, Sen AK, Chatterjee R, and Chaudhuri K.American International Journal of Research in Formal, Applied and Natural Sciences (AIJRFANS); 2014; 14-318:19-27.
  • Reactive Nitrogen Species Regulate Autophagy through ATM-AMPK-TSC2-mediated Suppression of mTORC1. Tripathi DN* & Chowdhury R* (*equal contributors), Trudel LJ, Tee AR, Walker CL and Wogan NG ψ. PNAS; Aug 2013, 110(32): E2950–E2957. IF 9.6.
  • Endogenously Produced Nitric Oxide Mitigates Sensitivity of Melanoma Cells to Cisplatin. Godoy LC, Anderson C, Chowdhury R, Trudel LJ and Wogan NG ψ. PNAS. Dec 2012, 109(50):20373-8. IF 9.6.
  • Nitric Oxide produced endogenously is responsible for Hypoxia induced HIF-1 alpha stabilization in Colon Carcinoma Cells. Chowdhury R, Godoy LC, Thiantanawat AT, Trudel LJ, Deen WM and Wogan NG ψ. Chem Res in Toxicol. ACS Publications, Oct 2012, 25(10): 2194-202. IF 3.2.
  • Presence of strong association of the major histocompatibility complex (MHC) class I allele  HLA-A*26:01 with idiopathic hypoparathyroidism. With Indian Genome Variation Consortium. J Clin Endocrinol Meta. 2012, Sep; 97(9):E1820-4. IF 5.4
  • Arsenic Induced Cell Proliferation is Associated with Enhanced ROS Generation, Erk Signaling and CyclinA Expression. Chowdhury R, Chatterjee R, Giri AK and Chaudhuri K ψ. Toxicol Letters. Elsevier Publishers, 2010 Oct; Vol 198(2): 263-71. 
  • EGLN1 involvement in high-altitude adaptation revealed through genetic analysis of extreme constitution types defined in Ayurveda. With Indian Genome Variation Consortium. PNAS. 2010; Vol. 107, issue 44, 18961-18966.
  • Expression of metallothionein-1 (MT-1) mRNA in the rat testes and liver after cadmium injection. Mukhopadhyay D, Mitra A, Nandi P, Chowdhury R, Chaudhuri K and Bhattacharya A ψ. Sys Bio Reprod Med. Informa Healthcare Publishers, 2009 Dec; Vol 55(5-6):188-92. 
  • Arsenic induced apoptosis in malignant melanoma cells is enhanced by menadione through ROS  generation, p38 signaling and p53 activation. Chowdhury R, Chowdhury S, Mandal C and Chaudhuri K ψ. Apoptosis. Springer Publishers, 2009; 14(1): 108-23. 
  • Isolation and Characterization of an arsenic resistant bacterium from a bore-well in West Bengal, India. Chowdhury R, Sen AK, Karak P, Giri AK and Chaudhuri K ψ. Annals of Microbiol. Springer Publishers, 2009; Vol 59 (2); 1-6. 
  • In vitro and in vivo reduction of sodium arsenite induced toxicity by aqueous garlic extract. Chowdhury R, Dutta A, Giri AK and Chaudhuri K ψ; Food and Chemical Toxicol. Elsevier Publishers, 2008; Vol 46(2); 740-51. 
  • Chronic exposure to arsenic at low concentration has toxic effect in human but short term exposure in vitro induces apoptosis. Chowdhury R, Roychoudhury P and Chaudhuri K ψ. Icfai Journal of Biotech. 2008, Vol II (3); 17-23.
  • Genetic landscape of the people of India: a canvas for disease gene exploration. Journal of Genetics. 2008, Volume 87; 3-20 (with Human Genome Cosnsortium).
  • Comparison of health effects between individuals with and without skin lesions in the population exposed to arsenic through drinking water in West Bengal, India. Ghosh P, Banerjee M, Chaudhuri S, Chowdhury R, Das J and Giri AK ψ; Journal of Exposure Science & Environmental Epidemiology. Nature Publishers, 2007; Vol 17; 215–23. 
  • Novel glycoconjugates of diospyrin, a quinonoid plant product: synthesis and evaluation of cytotoxicity against human malignant melanoma (A375) and laryngeal carcinoma (Hep2). Sarma MD, Ghosh R, Chowdhury R, Chaudhuri K and Hazra B ψ; Organic & Biomolecular Chemistry. RSC Publishers, 2007; Vol 5; 3115-3125. 
  • HnRNPE2 is downregulated in human oral cancer cells and the overexpression of hnRNPE2 induces apoptosis. Roychoudhury P, Paul R, Chowdhury R & Chaudhuri Kψ; Molecular Carcinogenesis; Wiley Publishers. 2006; Vol 46; 198-207.
  • The Indian Genome Variation database (IGVdb): a project overview; With Indian Genome Variation Consortium. Human Genetics. Springer Publishers, 2005; Vol 118; 1-11. 

 

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